[hdf-forum] Re: Throwing error when converting between long and long long

Tue Jun 30 16:11:56 EDT 2009

Just to follow up with this. I made a mistake when I was editing the  
H5detect.c file while inserting special case statements for OS X.  
After these were fixed I can now build a proper _functional_ quad  
binary HDF5 library.
---
Mike Jackson                 www.bluequartz.net

On Jun 30, 2009, at 12:11 PM, Michael Jackson wrote:

> I am running hdf5 version 1.6.9 where I have compiled it as a  
> Universal Binary (x86_64 and i386) on Intel OS X (10.5.7). Currently  
> I am running into a problem where I get a bunch of errors output  
> (see below) and then my program crashes.
>
>  I have tried to step through the code to try and see what might be  
> happening but I can not seem to pinpoint where the trouble is coming  
> from. I can reproduce it if I build both 32 bit and 64 bit binaries  
> into the same library. The problem seems to be some disagreement  
> between the "size" of "long" and "long long". These are 4 and 8 on a  
> 32 bit system and 8 and 8 on a 64 bit system so the error kinda  
> makes sense.
>   So my gut feeling is somewhere in the configuration process the  
> proper guards are NOT being put into place to take into account the  
> possibility of multiple-archs in the same library? Sound about right?
>
> And oddly enough this bug is only triggered when I run in a  
> debugger. If I run the program normally I don't seem to get the  
> error. odd. Any help is appreciated.
>
> Sizeof(long): 4
> Sizeof(long_long): 8
> HDF5-DIAG: Error detected in HDF5 library version: 1.6.9 thread 0.   
> Back trace follows.
>  #000: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 2015 in  
> H5T_register(): unable to locate/allocate conversion path
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #001: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 3944 in  
> H5T_path_find(): unable to initialize conversion function
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #002: /Users/mjackson/Workspace/hdf5-169/src/H5Tconv.c line 5829 in  
> H5T_conv_long_int(): disagreement about datatype size
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #003: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 2015 in  
> H5T_register(): unable to locate/allocate conversion path
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #004: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 3944 in  
> H5T_path_find(): unable to initialize conversion function
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #005: /Users/mjackson/Workspace/hdf5-169/src/H5Tconv.c line 5797 in  
> H5T_conv_ulong_ushort(): disagreement about datatype size
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #006: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 2015 in  
> H5T_register(): unable to locate/allocate conversion path
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #007: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 3944 in  
> H5T_path_find(): unable to initialize conversion function
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #008: /Users/mjackson/Workspace/hdf5-169/src/H5Tconv.c line 5764 in  
> H5T_conv_ulong_short(): disagreement about datatype size
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #009: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 2015 in  
> H5T_register(): unable to locate/allocate conversion path
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #010: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 3944 in  
> H5T_path_find(): unable to initialize conversion function
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #011: /Users/mjackson/Workspace/hdf5-169/src/H5Tconv.c line 5732 in  
> H5T_conv_long_ushort(): disagreement about datatype size
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #012: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 2015 in  
> H5T_register(): unable to locate/allocate conversion path
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #013: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 3944 in  
> H5T_path_find(): unable to initialize conversion function
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #014: /Users/mjackson/Workspace/hdf5-169/src/H5Tconv.c line 5699 in  
> H5T_conv_long_short(): disagreement about datatype size
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>
>  #015: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 2015 in  
> H5T_register(): unable to locate/allocate conversion path
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #016: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 3944 in  
> H5T_path_find(): unable to initialize conversion function
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #017: /Users/mjackson/Workspace/hdf5-169/src/H5Tconv.c line 5989 in  
> H5T_conv_ulong_long(): disagreement about datatype size
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #018: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 2015 in  
> H5T_register(): unable to locate/allocate conversion path
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #019: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 3944 in  
> H5T_path_find(): unable to initialize conversion function
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #020: /Users/mjackson/Workspace/hdf5-169/src/H5Tconv.c line 5957 in  
> H5T_conv_long_ulong(): disagreement about datatype size
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #021: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 2015 in  
> H5T_register(): unable to locate/allocate conversion path
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #022: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 3944 in  
> H5T_path_find(): unable to initialize conversion function
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #023: /Users/mjackson/Workspace/hdf5-169/src/H5Tconv.c line 6087 in  
> H5T_conv_ulong_llong(): disagreement about datatype size
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #024: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 2015 in  
> H5T_register(): unable to locate/allocate conversion path
>
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #025: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 3944 in  
> H5T_path_find(): unable to initialize conversion function
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #026: /Users/mjackson/Workspace/hdf5-169/src/H5Tconv.c line 6054 in  
> H5T_conv_long_ullong(): disagreement about datatype size
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #027: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 2015 in  
> H5T_register(): unable to locate/allocate conversion path
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #028: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 3944 in  
> H5T_path_find(): unable to initialize conversion function
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #029: /Users/mjackson/Workspace/hdf5-169/src/H5Tconv.c line 6616 in  
> H5T_conv_ullong_long(): disagreement about datatype size
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #030: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 2015 in  
> H5T_register(): unable to locate/allocate conversion path
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
>  #031: /Users/mjackson/Workspace/hdf5-169/src/H5T.c line 3944 in  
> H5T_path_find(): unable to initialize conversion function
>    major(13): Datatype interface
>    minor(29): Unable to initialize object
> Assertion failed: (H5P_LST_DATASET_XFER_g!=(-1)), function  
> H5AC_init_interface, file /Users/mjackson/Workspace/hdf5-169/src/ 
> H5AC.c, line 226.
>
> _________________________________________________________
> Mike Jackson                  mike.jackson at bluequartz.net
> BlueQuartz Software                    www.bluequartz.net
> Principal Software Engineer                  Dayton, Ohio
>
>
>

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